Phycisphaeraceae bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Description

Phycisphaeraceae bacterium is characterized by having three distinct replicons, which suggests a complex genomic organization that may facilitate diverse metabolic pathways. The organism is cataloged under several accessions, including NYZC00000000.1, PAIY00000000.1, and PBAS00000000.1, which represent different genomic sequences associated with this bacterium. This family of bacteria, Phycisphaeraceae, is often associated with aquatic environments, reflecting an ecological niche that may have implications for nutrient cycling in those systems. The presence of multiple replicons could indicate an adaptation to varying environmental conditions, allowing the bacterium to thrive in complex habitats. While specific metabolic capabilities or interactions with other microorganisms are not provided, the genomic diversity suggested by the three replicons may enable the bacterium to participate in essential ecological functions, such as the decomposition of organic matter or the cycling of nutrients in aquatic ecosystems. Understanding the genomic structure of Phycisphaeraceae bacterium is crucial as it may reveal insights into its ecological role and potential applications in biotechnology, particularly in bioremediation or biomass production. Overall, the traits of this organism point to its potential importance in maintaining the health and functionality of its aquatic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phycisphaeraceae bacterium isolate SP4387

Gene Summary

Adenine Count

825010 bp

Thymine Count

822038 bp

Guanine Count

842688 bp

Cytosine Count

864191 bp

Genome Length

3354005 bp

Protein-coding Genes

2789 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chloride channel proteinCMJ18_13315Not AvailableNegative3661698 - 366355165572.1
hypothetical proteinCMJ18_13320Not AvailablePositive3663996 - 366586567270.6
methyltransferase type 11CMJ18_13325Not AvailableNegative3666038 - 366707238311.6
hypothetical proteinCMJ18_13330Not AvailableNegative3667141 - 366910569170.0
hypothetical proteinCMJ18_13335Not AvailableNegative3669539 - 367039631635.1
aspartate aminotransferase family proteinCMJ18_13340Not AvailableNegative3670471 - 367163741586.8
hypothetical proteinCMJ18_13345Not AvailablePositive3671774 - 367282636770.0
dna-binding proteinCMJ18_13350Not AvailableNegative3672985 - 367332612512.9
hypothetical proteinCMJ18_13355Not AvailableNegative3673501 - 367430428247.7
rna polymerase sigma-54 factorCMJ18_13360Not AvailableNegative3674414 - 367594658409.9

Displaying genes 5501 – 5510 of 13495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.