Phycisphaeraceae bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Description

Phycisphaeraceae bacterium is characterized by having three distinct replicons, which suggests a complex genomic organization that may facilitate diverse metabolic pathways. The organism is cataloged under several accessions, including NYZC00000000.1, PAIY00000000.1, and PBAS00000000.1, which represent different genomic sequences associated with this bacterium. This family of bacteria, Phycisphaeraceae, is often associated with aquatic environments, reflecting an ecological niche that may have implications for nutrient cycling in those systems. The presence of multiple replicons could indicate an adaptation to varying environmental conditions, allowing the bacterium to thrive in complex habitats. While specific metabolic capabilities or interactions with other microorganisms are not provided, the genomic diversity suggested by the three replicons may enable the bacterium to participate in essential ecological functions, such as the decomposition of organic matter or the cycling of nutrients in aquatic ecosystems. Understanding the genomic structure of Phycisphaeraceae bacterium is crucial as it may reveal insights into its ecological role and potential applications in biotechnology, particularly in bioremediation or biomass production. Overall, the traits of this organism point to its potential importance in maintaining the health and functionality of its aquatic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phycisphaeraceae bacterium isolate SP4387

Gene Summary

Adenine Count

825010 bp

Thymine Count

822038 bp

Guanine Count

842688 bp

Cytosine Count

864191 bp

Genome Length

3354005 bp

Protein-coding Genes

2789 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMJ19_18105Not AvailablePositive4599744 - 45999718558.44
thioredoxinCMJ19_18110Not AvailablePositive4600009 - 460034112118.5
peptidase m16CMJ19_18115Not AvailablePositive4600469 - 460169245564.8
3,4-dihydroxy-2-butanone-4-phosphate synthaseCMJ19_18120Not AvailablePositive4601803 - 460298743214.4
glycine--trna ligaseCMJ19_18125Not AvailableNegative4603304 - 460489360177.4
radical sam proteinCMJ19_18130Not AvailablePositive4605102 - 460572722893.3
hypothetical proteinCMJ19_18135Not AvailableNegative4605728 - 460634422770.7
hypothetical proteinCMJ19_18140Not AvailableNegative4606358 - 460827771463.0
hypothetical proteinCMJ19_18145Not AvailablePositive4608639 - 460919020179.3
iscs subfamily cysteine desulfuraseCMJ19_18150Not AvailablePositive4609235 - 461044944239.0

Displaying genes 12071 – 12080 of 13495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.