Helicobacter sp. MIT 01-3238

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter sp. MIT 01-3238 is characterized by having a single replicon, which indicates a relatively straightforward genomic structure compared to other bacteria that may possess multiple replicons. This trait can influence the organism's replication and stability, potentially impacting its adaptability and evolutionary dynamics. The genomic information for Helicobacter sp. MIT 01-3238 is documented under the accession number NXLN00000000.1, which serves as a reference for researchers looking to access the genetic data of this strain. The specific features of its genome, such as gene content, metabolic pathways, and potential virulence factors, are not provided; therefore, further study would be needed to elucidate these aspects. Biologically, Helicobacter species are often associated with gastrointestinal environments, particularly in the stomach of various hosts, where they can play a role in both health and disease. The presence of a single replicon in Helicobacter sp. MIT 01-3238 may suggest a specialized adaptation to its ecological niche. Understanding its genomic structure and ecological role could provide insights into its interaction with host organisms and its potential impact on microbial communities in the gastrointestinal tract. This highlights the importance of studying specific strains to better understand their ecological roles and evolutionary strategies within their environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter sp. MIT 01-3238
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter sp. MIT 01-3238
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter sp. MIT 01-3238

Gene Summary

Adenine Count

723115 bp

Thymine Count

710761 bp

Guanine Count

493417 bp

Cytosine Count

487873 bp

Genome Length

2415166 bp

Protein-coding Genes

2081 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permeaseCQA40_10190Not AvailablePositive2284184 - 228526340722.1
lipopolysaccharide core biosynthesis protein lpsaCQA40_10195Not AvailablePositive2285336 - 228646643457.3
duf455 domain-containing proteinCQA40_10200Not AvailablePositive2286616 - 228751234245.7
tigr02757 family proteinCQA40_10205Not AvailablePositive2287649 - 228857235644.2
biopolymer transporter exbdCQA40_10210Not AvailableNegative2288672 - 228905814418.4
tonb-system energizer exbbCQA40_10215Not AvailableNegative2289102 - 228976723910.0
ssra-binding protein smpbCQA40_10220Not AvailableNegative2289853 - 229030817438.8
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCQA40_10225Not AvailableNegative2290355 - 229140738711.6
carbon storage regulatorCQA40_10230Not AvailableNegative2291417 - 22916478479.59
trna pseudouridine(55) synthase trubCQA40_10235Not AvailableNegative2291631 - 229246730590.2

Displaying genes 2011 – 2020 of 2124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.