Providencia rettgeri strain PR002

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Providencia

Description

Providencia rettgeri strain PR002 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. As a facultative anaerobe, it can thrive in both aerobic and anaerobic environments, demonstrating its adaptability to various habitats. This strain is categorized as a chemoheterotroph, indicating that it derives its energy from organic compounds. The optimal growth temperature for Providencia rettgeri strain PR002 is 37°C, positioning it within the mesophilic temperature range, which is conducive to its survival in warm-blooded hosts. This strain has been isolated from multiple habitats and has shown pathogenic potential primarily in humans, where it is associated with multisystem infections and ventilator-associated pneumonia (VAP). Additionally, it can infect other hosts, including Bos (cattle), amphibians, and serpents, as well as the specific amphibian Bombina bombina. Notably, strain PR002 does not form spores, which suggests that its survival strategies may rely on other mechanisms rather than sporulation. The strain has a single replicon, as indicated by its accession number NXKD00000000.1, which may reflect its genetic organization and replication capabilities. The presence of Providencia rettgeri in diverse hosts and its pathogenic effects highlight its ecological role and the potential health risks it poses in clinical settings, particularly in immunocompromised individuals. Understanding the biology and ecology of this strain can aid in the development of targeted interventions to manage infections associated with it.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusProvidencia
SpeciesProvidencia rettgeri
Strainstrain PR002

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Providencia rettgeri strain PR002
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos, Amphibia
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Providencia rettgeri strain PR002 NODE_113_length_203_cov_68.4324,

Gene Summary

Adenine Count

1432908 bp

Thymine Count

1433213 bp

Guanine Count

1000049 bp

Cytosine Count

966454 bp

Genome Length

4832624 bp

Protein-coding Genes

4064 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseCQA26_17270Not AvailableNegative3706223 - 370717034263.4
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCQA26_17275Not AvailableNegative3707227 - 370810231949.2
lipoprotein localization protein lolbCQA26_17280Not AvailableNegative3708099 - 370875524984.8
glutamyl-trna reductaseCQA26_17285Not AvailablePositive3709338 - 371060046867.4
peptide chain release factor 1CQA26_17290Not AvailablePositive3710632 - 371171440484.5
protein-(glutamine-n5) methyltransferase, release factor-specificCQA26_17295Not AvailablePositive3711714 - 371254731445.5
hypothetical proteinCQA26_17300Not AvailablePositive3712570 - 371337930501.8
3-deoxy-8-phosphooctulonate synthaseCQA26_17305Not AvailablePositive3713425 - 371427930838.5
tigr01212 family radical sam proteinCQA26_17310Not AvailablePositive3714292 - 371519433599.2
hypothetical proteinCQA26_17315Not AvailablePositive3715215 - 371594927141.2

Displaying genes 3261 – 3270 of 4352 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Multisystem infectionsCausesPMC10546784
VapCausesPMC8258552
Ventilator-associated pneumoniaCausesPMC8258552

Displaying health effects 1 – 3 of 3 in total