Malaciobacter halophilus strain DSM 18005

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter halophilus strain DSM 18005 is a Gram-negative, rod-shaped bacterium characterized as a microaerophile, which means it requires low levels of oxygen for optimal growth. This strain is motile, enabling it to navigate its environment effectively. It is found in mangrove soils, a habitat known for its unique ecological conditions, including high salinity and fluctuating oxygen levels. The genomic makeup of M. halophilus strain DSM 18005 includes a single replicon, as indicated by its accession number NXIF00000000.1. This simple genomic structure may contribute to its adaptability in the challenging conditions of mangrove ecosystems. The presence of M. halophilus in mangrove soils suggests that it may play a role in the biogeochemical cycles within these environments, potentially influencing nutrient cycling and organic matter decomposition. Mangroves are critical ecosystems that provide numerous ecological services, and the microbial communities residing in them are essential for maintaining their health and functionality. Understanding the specific traits and ecological roles of bacteria like Malaciobacter halophilus can provide insights into the overall dynamics of microbial communities in mangrove habitats, highlighting the importance of microbial diversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter halophilus
Strainstrain DSM 18005

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter halophilus strain DSM 18005

Gene Summary

Adenine Count

998097 bp

Thymine Count

994952 bp

Guanine Count

376798 bp

Cytosine Count

376435 bp

Genome Length

2746292 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp endopeptidase, proteolytic subunit clppCP960_11960Not AvailablePositive2409972 - 241055621472.8
peptide deformylaseCP960_11965Not AvailablePositive2410568 - 241108319714.8
hypothetical proteinCP960_11970Not AvailableNegative2411095 - 241146314185.8
chemotaxis proteinCP960_11975Not AvailableNegative2411558 - 241309957165.4
fis family transcriptional regulatorCP960_11980Not AvailablePositive2413300 - 241481457061.3
gtpase eraCP960_11985Not AvailablePositive2414892 - 241577633605.0
hypothetical proteinCP960_11990Not AvailablePositive2415935 - 24161388183.37
hypothetical proteinCP960_11995Not AvailableNegative2416163 - 241775563413.4
hypothetical proteinCP960_12000Not AvailableNegative2418099 - 241898933511.8
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgCP960_12005Not AvailableNegative2419597 - 242145669594.9

Displaying genes 2381 – 2390 of 2712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.