Malaciobacter halophilus strain DSM 18005

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter halophilus strain DSM 18005 is a Gram-negative, rod-shaped bacterium characterized as a microaerophile, which means it requires low levels of oxygen for optimal growth. This strain is motile, enabling it to navigate its environment effectively. It is found in mangrove soils, a habitat known for its unique ecological conditions, including high salinity and fluctuating oxygen levels. The genomic makeup of M. halophilus strain DSM 18005 includes a single replicon, as indicated by its accession number NXIF00000000.1. This simple genomic structure may contribute to its adaptability in the challenging conditions of mangrove ecosystems. The presence of M. halophilus in mangrove soils suggests that it may play a role in the biogeochemical cycles within these environments, potentially influencing nutrient cycling and organic matter decomposition. Mangroves are critical ecosystems that provide numerous ecological services, and the microbial communities residing in them are essential for maintaining their health and functionality. Understanding the specific traits and ecological roles of bacteria like Malaciobacter halophilus can provide insights into the overall dynamics of microbial communities in mangrove habitats, highlighting the importance of microbial diversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter halophilus
Strainstrain DSM 18005

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter halophilus strain DSM 18005

Gene Summary

Adenine Count

998097 bp

Thymine Count

994952 bp

Guanine Count

376798 bp

Cytosine Count

376435 bp

Genome Length

2746292 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eama family transporterCP960_11760Not AvailableNegative2367908 - 236879232571.9
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCP960_11765Not AvailablePositive2368945 - 237021045364.4
hypothetical proteinCP960_11770Not AvailablePositive2370223 - 237130842632.9
hnh endonucleaseCP960_11775Not AvailablePositive2371309 - 237192924330.4
general secretion pathway protein gspdCP960_11780Not AvailableNegative2371931 - 237332252199.6
yigz family proteinCP960_11785Not AvailableNegative2373376 - 237394821978.4
tlya family rrna (cytidine-2'-o)-methyltransferaseCP960_11790Not AvailablePositive2374051 - 237475827460.2
bifunctional riboflavin kinase/fmn adenylyltransferaseCP960_11795Not AvailablePositive2374727 - 237556631985.8
carboxy-s-adenosyl-l-methionine synthase cmoaCP960_11800Not AvailablePositive2375598 - 237630527283.7
thioredoxin-dependent thiol peroxidaseCP960_11805Not AvailablePositive2376321 - 237679117776.4

Displaying genes 2341 – 2350 of 2712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.