Malaciobacter halophilus strain DSM 18005

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter halophilus strain DSM 18005 is a Gram-negative, rod-shaped bacterium characterized as a microaerophile, which means it requires low levels of oxygen for optimal growth. This strain is motile, enabling it to navigate its environment effectively. It is found in mangrove soils, a habitat known for its unique ecological conditions, including high salinity and fluctuating oxygen levels. The genomic makeup of M. halophilus strain DSM 18005 includes a single replicon, as indicated by its accession number NXIF00000000.1. This simple genomic structure may contribute to its adaptability in the challenging conditions of mangrove ecosystems. The presence of M. halophilus in mangrove soils suggests that it may play a role in the biogeochemical cycles within these environments, potentially influencing nutrient cycling and organic matter decomposition. Mangroves are critical ecosystems that provide numerous ecological services, and the microbial communities residing in them are essential for maintaining their health and functionality. Understanding the specific traits and ecological roles of bacteria like Malaciobacter halophilus can provide insights into the overall dynamics of microbial communities in mangrove habitats, highlighting the importance of microbial diversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter halophilus
Strainstrain DSM 18005

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter halophilus strain DSM 18005

Gene Summary

Adenine Count

998097 bp

Thymine Count

994952 bp

Guanine Count

376798 bp

Cytosine Count

376435 bp

Genome Length

2746292 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium:proton antiporterCP960_08580Not AvailableNegative1745182 - 174688861452.4
abc transporter permeaseCP960_08585Not AvailableNegative1746999 - 174779328944.4
16s rrna (guanine(966)-n(2))-methyltransferase rsmdCP960_08590Not AvailableNegative1747802 - 174839522611.3
5-(carboxyamino)imidazole ribonucleotide mutaseCP960_08595Not AvailableNegative1748408 - 174893218551.1
5-(carboxyamino)imidazole ribonucleotide synthaseCP960_08600Not AvailableNegative1748929 - 175008042377.3
hypothetical proteinCP960_08605Not AvailablePositive1750435 - 175103122965.3
ribonuclease yCP960_08610Not AvailableNegative1751066 - 175261057514.5
5-formyltetrahydrofolate cyclo-ligaseCP960_08615Not AvailableNegative1752636 - 175317521263.6
thioredoxinCP960_08620Not AvailablePositive1753237 - 175379721096.3
signal recognition particle-docking protein ftsyCP960_08625Not AvailablePositive1753798 - 175485639424.0

Displaying genes 1711 – 1720 of 2712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.