Malaciobacter halophilus strain DSM 18005

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter halophilus strain DSM 18005 is a Gram-negative, rod-shaped bacterium characterized as a microaerophile, which means it requires low levels of oxygen for optimal growth. This strain is motile, enabling it to navigate its environment effectively. It is found in mangrove soils, a habitat known for its unique ecological conditions, including high salinity and fluctuating oxygen levels. The genomic makeup of M. halophilus strain DSM 18005 includes a single replicon, as indicated by its accession number NXIF00000000.1. This simple genomic structure may contribute to its adaptability in the challenging conditions of mangrove ecosystems. The presence of M. halophilus in mangrove soils suggests that it may play a role in the biogeochemical cycles within these environments, potentially influencing nutrient cycling and organic matter decomposition. Mangroves are critical ecosystems that provide numerous ecological services, and the microbial communities residing in them are essential for maintaining their health and functionality. Understanding the specific traits and ecological roles of bacteria like Malaciobacter halophilus can provide insights into the overall dynamics of microbial communities in mangrove habitats, highlighting the importance of microbial diversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter halophilus
Strainstrain DSM 18005

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter halophilus strain DSM 18005

Gene Summary

Adenine Count

998097 bp

Thymine Count

994952 bp

Guanine Count

376798 bp

Cytosine Count

376435 bp

Genome Length

2746292 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylbilane synthaseCP960_06570Not AvailablePositive1324861 - 132580234957.4
hydrolaseCP960_06575Not AvailablePositive1325847 - 132638920410.0
2-methylaconitate cis-trans isomerase prpfCP960_06580Not AvailableNegative1326427 - 132760241908.4
fe/s-dependent 2-methylisocitrate dehydratase acndCP960_06585Not AvailableNegative1327727 - 133031895020.2
methylcitrate synthaseCP960_06590Not AvailableNegative1330483 - 133159241273.5
methylisocitrate lyaseCP960_06595Not AvailableNegative1331631 - 133251532343.6
hypothetical proteinCP960_06600Not AvailablePositive1332698 - 133367538859.6
lysine transporter lyseCP960_06605Not AvailablePositive1333675 - 133430423442.6
hypothetical proteinCP960_06610Not AvailableNegative1334335 - 133488320326.5
hypothetical proteinCP960_06615Not AvailableNegative1335068 - 133542713805.6

Displaying genes 1311 – 1320 of 2712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.