Malaciobacter halophilus strain DSM 18005

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Malaciobacter

Description

Malaciobacter halophilus strain DSM 18005 is a Gram-negative, rod-shaped bacterium characterized as a microaerophile, which means it requires low levels of oxygen for optimal growth. This strain is motile, enabling it to navigate its environment effectively. It is found in mangrove soils, a habitat known for its unique ecological conditions, including high salinity and fluctuating oxygen levels. The genomic makeup of M. halophilus strain DSM 18005 includes a single replicon, as indicated by its accession number NXIF00000000.1. This simple genomic structure may contribute to its adaptability in the challenging conditions of mangrove ecosystems. The presence of M. halophilus in mangrove soils suggests that it may play a role in the biogeochemical cycles within these environments, potentially influencing nutrient cycling and organic matter decomposition. Mangroves are critical ecosystems that provide numerous ecological services, and the microbial communities residing in them are essential for maintaining their health and functionality. Understanding the specific traits and ecological roles of bacteria like Malaciobacter halophilus can provide insights into the overall dynamics of microbial communities in mangrove habitats, highlighting the importance of microbial diversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusMalaciobacter
SpeciesMalaciobacter halophilus
Strainstrain DSM 18005

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmangrove soils
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Malaciobacter halophilus strain DSM 18005

Gene Summary

Adenine Count

998097 bp

Thymine Count

994952 bp

Guanine Count

376798 bp

Cytosine Count

376435 bp

Genome Length

2746292 bp

Protein-coding Genes

2660 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-disulfide reductaseCP960_04965Not AvailablePositive995613 - 9957514563.52
4-hydroxy-tetrahydrodipicolinate reductaseCP960_04970Not AvailablePositive995762 - 99653527757.3
amidophosphoribosyltransferaseCP960_04975Not AvailablePositive996625 - 99797450407.4
tigr01212 family radical sam proteinCP960_04980Not AvailablePositive997974 - 99893636906.5
lysr family transcriptional regulatorCP960_04985Not AvailableNegative998958 - 99985434174.3
atp-dependent dna helicaseCP960_04990Not AvailablePositive999972 - 100202678081.8
trna pseudouridine(55) synthase trubCP960_04995Not AvailablePositive1002075 - 100292332837.0
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCP960_05000Not AvailablePositive1002924 - 100369429335.2
ssra-binding proteinCP960_05005Not AvailablePositive1003694 - 100416418277.5
cytochrome-c oxidase, cbb3-type subunit iCP960_05010Not AvailablePositive1004313 - 100578255601.6

Displaying genes 991 – 1000 of 2712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.