Thalassospira lohafexi strain 139Z-12

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira lohafexi strain 139Z-12 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is indicative of its genetic structure and replication strategy. The strain is cataloged under the accession number NXGX00000000.1, which provides a reference for researchers looking to access its genomic data. The classification of T. lohafexi as a Gram-negative organism suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often influences the bacterium’s interactions with its environment, including its susceptibility to antibiotics and its overall ecological role. In terms of ecological insight, the presence of T. lohafexi in marine environments suggests it may play a role in the marine microbial community, potentially contributing to nutrient cycling and the degradation of organic matter. The specific adaptations of Gram-negative bacteria like T. lohafexi allow them to thrive in diverse aquatic habitats, thus influencing the dynamics of marine ecosystems. Understanding the traits and ecological roles of such microorganisms is essential for comprehending the complexities of marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira lohafexi
Strainstrain 139Z-12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira lohafexi strain 139Z-12 contig00023, whole genome

Gene Summary

Adenine Count

1083084 bp

Thymine Count

1110984 bp

Guanine Count

1288167 bp

Cytosine Count

1242732 bp

Genome Length

4724967 bp

Protein-coding Genes

4214 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1508 domain-containing proteinCOO92_19650Not AvailableNegative4263859 - 42640446919.04
lysr family transcriptional regulatorCOO92_19655Not AvailableNegative4264140 - 426501532537.1
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseCOO92_19660Not AvailablePositive4265135 - 426625939712.9
s-formylglutathione hydrolaseCOO92_19665Not AvailablePositive4266347 - 426720431292.8
cobalt abc transporter permeaseCOO92_19670Not AvailableNegative4267304 - 426791821956.6
cobalt abc transporter atp-binding proteinCOO92_19675Not AvailableNegative4267915 - 426858925263.4
biotin transporter bioyCOO92_19680Not AvailableNegative4268688 - 426923618650.6
transcriptional regulatorCOO92_19685Not AvailableNegative4269433 - 426979213219.5
vanillate o-demethylase oxidoreductase vanbCOO92_19690Not AvailableNegative4269779 - 427022516755.4
urease accessory protein uregCOO92_19695Not AvailableNegative4270392 - 427101221769.1

Displaying genes 3961 – 3970 of 4338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.