Thalassospira lohafexi strain 139Z-12

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira lohafexi strain 139Z-12 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is indicative of its genetic structure and replication strategy. The strain is cataloged under the accession number NXGX00000000.1, which provides a reference for researchers looking to access its genomic data. The classification of T. lohafexi as a Gram-negative organism suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often influences the bacterium’s interactions with its environment, including its susceptibility to antibiotics and its overall ecological role. In terms of ecological insight, the presence of T. lohafexi in marine environments suggests it may play a role in the marine microbial community, potentially contributing to nutrient cycling and the degradation of organic matter. The specific adaptations of Gram-negative bacteria like T. lohafexi allow them to thrive in diverse aquatic habitats, thus influencing the dynamics of marine ecosystems. Understanding the traits and ecological roles of such microorganisms is essential for comprehending the complexities of marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira lohafexi
Strainstrain 139Z-12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira lohafexi strain 139Z-12 contig00023, whole genome

Gene Summary

Adenine Count

1083084 bp

Thymine Count

1110984 bp

Guanine Count

1288167 bp

Cytosine Count

1242732 bp

Genome Length

4724967 bp

Protein-coding Genes

4214 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCOO92_16795Not AvailableNegative3630657 - 363110015642.5
Trna-metNot AvailableNot AvailablePositive3631849 - 3631925Not Available
l-serine ammonia-lyaseCOO92_16810Not AvailableNegative3632197 - 363360949562.1
serine hydroxymethyltransferaseCOO92_16815Not AvailableNegative3633615 - 363488345193.0
sarcosine oxidase subunit gammaCOO92_16820Not AvailableNegative3634937 - 363548819728.8
sarcosine oxidase subunit alphaCOO92_16825Not AvailableNegative3635532 - 3638525108832.0
sarcosine oxidase subunit delta family proteinCOO92_16830Not AvailableNegative3638522 - 363884212223.3
sarcosine oxidase subunit betaCOO92_16835Not AvailableNegative3638854 - 364010745201.9
arac family transcriptional regulatorCOO92_16840Not AvailablePositive3640229 - 364122136543.2
dehydrogenaseCOO92_16845Not AvailableNegative3641348 - 364390995593.4

Displaying genes 3401 – 3410 of 4338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.