Thalassospira lohafexi strain 139Z-12

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira lohafexi strain 139Z-12 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is indicative of its genetic structure and replication strategy. The strain is cataloged under the accession number NXGX00000000.1, which provides a reference for researchers looking to access its genomic data. The classification of T. lohafexi as a Gram-negative organism suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often influences the bacterium’s interactions with its environment, including its susceptibility to antibiotics and its overall ecological role. In terms of ecological insight, the presence of T. lohafexi in marine environments suggests it may play a role in the marine microbial community, potentially contributing to nutrient cycling and the degradation of organic matter. The specific adaptations of Gram-negative bacteria like T. lohafexi allow them to thrive in diverse aquatic habitats, thus influencing the dynamics of marine ecosystems. Understanding the traits and ecological roles of such microorganisms is essential for comprehending the complexities of marine biodiversity and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira lohafexi
Strainstrain 139Z-12

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira lohafexi strain 139Z-12 contig00023, whole genome

Gene Summary

Adenine Count

1083084 bp

Thymine Count

1110984 bp

Guanine Count

1288167 bp

Cytosine Count

1242732 bp

Genome Length

4724967 bp

Protein-coding Genes

4214 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCOO92_13060Not AvailablePositive2839104 - 28393258180.34
histidine kinaseCOO92_13065Not AvailablePositive2839331 - 2842069100623.0
laci family transcriptional regulatorCOO92_13070Not AvailablePositive2842427 - 284347936628.9
abc transporter substrate-binding proteinCOO92_13075Not AvailablePositive2843485 - 284450437294.4
spermidine/putrescine abc transporter permeaseCOO92_13080Not AvailablePositive2844634 - 284546129522.3
spermidine/putrescine abc transporter atp-binding proteinCOO92_13085Not AvailablePositive2845458 - 284623727832.1
abc transporter atp-binding proteinCOO92_13090Not AvailablePositive2846230 - 284726436986.6
nucleoside hydrolaseCOO92_13095Not AvailablePositive2847264 - 284819332618.3
adenosine deaminaseCOO92_13100Not AvailablePositive2848190 - 284997463274.7
alpha-hydroxy-acid oxidizing enzymeCOO92_13105Not AvailableNegative2850058 - 285122742265.8

Displaying genes 2691 – 2700 of 4338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.