Rhizobium sophoriradicis strain L101

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sophoriradicis strain L101 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in various environments. This strain is notable for having a single replicon, suggesting a streamlined genomic structure that may influence its replication and functional capabilities. The genetic information for this strain is accessible under the accession number NXDM00000000.1, providing a point for further research and exploration of its characteristics. Strains of Rhizobium are renowned for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation, which is essential for plant growth and soil fertility. The specific ecological role of R. sophoriradicis strain L101 in its environment may involve interactions with specific plant hosts, potentially contributing to nutrient cycling and enhancement of soil quality. The presence of flagella suggests that this strain can navigate its environment effectively, which may be crucial for establishing symbiotic relationships with host plants. Overall, Rhizobium sophoriradicis strain L101 exemplifies the adaptive features of rhizobial species, highlighting the importance of motility and genetic organization in their ecological roles. Understanding this strain’s biology could provide insights into its applications in agriculture and environmental sustainability, particularly in improving nitrogen availability in soils where it is present.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sophoriradicis
Strainstrain L101

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sophoriradicis strain L101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sophoriradicis strain L101 Scaffold110_1, whole genome

Gene Summary

Adenine Count

1337900 bp

Thymine Count

1337593 bp

Guanine Count

2101819 bp

Cytosine Count

2106474 bp

Genome Length

6883786 bp

Protein-coding Genes

6296 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseCPT34_26925Not AvailablePositive5544113 - 554540846272.8
thioredoxinCPT34_26930Not AvailableNegative5545481 - 554580111391.7
double-strand break repair helicase addaCPT34_26935Not AvailableNegative5545877 - 5549428130591.0
double-strand break repair protein addbCPT34_26940Not AvailableNegative5549421 - 5552615115653.0
mannose-1-phosphate guanylyltransferaseCPT34_26945Not AvailableNegative5552619 - 555335026713.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCPT34_26950Not AvailableNegative5553364 - 555487555909.7
alkaline phosphataseCPT34_26955Not AvailableNegative5554872 - 555745794419.6
adenosylhomocysteinaseCPT34_26960Not AvailableNegative5557661 - 555906150712.8
hpr family phosphocarrier proteinCPT34_26965Not AvailableNegative5559334 - 55596099591.67
pts fructose transporter subunit iiaCPT34_26970Not AvailableNegative5559619 - 556002014163.2

Displaying genes 5171 – 5180 of 6381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.