Rhizobium sophoriradicis strain L101

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sophoriradicis strain L101 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in various environments. This strain is notable for having a single replicon, suggesting a streamlined genomic structure that may influence its replication and functional capabilities. The genetic information for this strain is accessible under the accession number NXDM00000000.1, providing a point for further research and exploration of its characteristics. Strains of Rhizobium are renowned for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation, which is essential for plant growth and soil fertility. The specific ecological role of R. sophoriradicis strain L101 in its environment may involve interactions with specific plant hosts, potentially contributing to nutrient cycling and enhancement of soil quality. The presence of flagella suggests that this strain can navigate its environment effectively, which may be crucial for establishing symbiotic relationships with host plants. Overall, Rhizobium sophoriradicis strain L101 exemplifies the adaptive features of rhizobial species, highlighting the importance of motility and genetic organization in their ecological roles. Understanding this strain’s biology could provide insights into its applications in agriculture and environmental sustainability, particularly in improving nitrogen availability in soils where it is present.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sophoriradicis
Strainstrain L101

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sophoriradicis strain L101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sophoriradicis strain L101 Scaffold110_1, whole genome

Gene Summary

Adenine Count

1337900 bp

Thymine Count

1337593 bp

Guanine Count

2101819 bp

Cytosine Count

2106474 bp

Genome Length

6883786 bp

Protein-coding Genes

6296 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhamnose abc transporter substrate-binding proteinCPT34_17555Not AvailableNegative3610670 - 361166534419.4
deor/glpr transcriptional regulatorCPT34_17560Not AvailableNegative3611712 - 361252429434.6
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseCPT34_17565Not AvailablePositive3612723 - 361481976028.5
yqae/pmp3 family membrane proteinCPT34_17570Not AvailableNegative3614821 - 36149795832.71
l-rhamnose catabolism isomeraseCPT34_17575Not AvailablePositive3615057 - 361634947018.3
alkylhydroperoxidaseCPT34_17580Not AvailableNegative3616410 - 361686816515.8
rna polymerase subunit sigma-70CPT34_17585Not AvailablePositive3616977 - 361784331245.2
amidohydrolase/deacetylase family metallohydrolaseCPT34_17590Not AvailablePositive3618105 - 361931343297.1
plasmid stabilization proteinCPT34_17595Not AvailableNegative3619379 - 36196279189.03
iclr family transcriptional regulatorCPT34_17600Not AvailableNegative3619692 - 362053130458.1

Displaying genes 3421 – 3430 of 6381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.