Rhizobium sophoriradicis strain L101

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sophoriradicis strain L101 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in various environments. This strain is notable for having a single replicon, suggesting a streamlined genomic structure that may influence its replication and functional capabilities. The genetic information for this strain is accessible under the accession number NXDM00000000.1, providing a point for further research and exploration of its characteristics. Strains of Rhizobium are renowned for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation, which is essential for plant growth and soil fertility. The specific ecological role of R. sophoriradicis strain L101 in its environment may involve interactions with specific plant hosts, potentially contributing to nutrient cycling and enhancement of soil quality. The presence of flagella suggests that this strain can navigate its environment effectively, which may be crucial for establishing symbiotic relationships with host plants. Overall, Rhizobium sophoriradicis strain L101 exemplifies the adaptive features of rhizobial species, highlighting the importance of motility and genetic organization in their ecological roles. Understanding this strain’s biology could provide insights into its applications in agriculture and environmental sustainability, particularly in improving nitrogen availability in soils where it is present.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sophoriradicis
Strainstrain L101

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sophoriradicis strain L101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sophoriradicis strain L101 Scaffold110_1, whole genome

Gene Summary

Adenine Count

1337900 bp

Thymine Count

1337593 bp

Guanine Count

2101819 bp

Cytosine Count

2106474 bp

Genome Length

6883786 bp

Protein-coding Genes

6296 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrodipicolinate synthase family proteinCPT34_17245Not AvailablePositive3542727 - 354389042647.4
sugar phosphate isomerase/epimeraseCPT34_17250Not AvailablePositive3543918 - 354474830184.4
gfo/idh/moca family oxidoreductaseCPT34_17255Not AvailablePositive3544789 - 354606648429.5
hydroxyacid dehydrogenaseCPT34_17260Not AvailableNegative3546077 - 354708736825.7
hypothetical proteinCPT34_17265Not AvailableNegative3547084 - 354894068578.3
laci family transcriptional regulatorCPT34_17270Not AvailableNegative3548945 - 354997636673.3
sugar abc transporter substrate-binding proteinCPT34_17275Not AvailablePositive3550120 - 355140646402.6
glycosyl hydrolase family 5CPT34_17280Not AvailableNegative3551512 - 355248336617.4
duf995 domain-containing proteinCPT34_17285Not AvailableNegative3552487 - 355300819456.0
n-acetylglucosaminyltransferaseCPT34_17290Not AvailableNegative3553043 - 355490868693.3

Displaying genes 3361 – 3370 of 6381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.