Rhizobium sophoriradicis strain L101

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sophoriradicis strain L101 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in various environments. This strain is notable for having a single replicon, suggesting a streamlined genomic structure that may influence its replication and functional capabilities. The genetic information for this strain is accessible under the accession number NXDM00000000.1, providing a point for further research and exploration of its characteristics. Strains of Rhizobium are renowned for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation, which is essential for plant growth and soil fertility. The specific ecological role of R. sophoriradicis strain L101 in its environment may involve interactions with specific plant hosts, potentially contributing to nutrient cycling and enhancement of soil quality. The presence of flagella suggests that this strain can navigate its environment effectively, which may be crucial for establishing symbiotic relationships with host plants. Overall, Rhizobium sophoriradicis strain L101 exemplifies the adaptive features of rhizobial species, highlighting the importance of motility and genetic organization in their ecological roles. Understanding this strain’s biology could provide insights into its applications in agriculture and environmental sustainability, particularly in improving nitrogen availability in soils where it is present.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sophoriradicis
Strainstrain L101

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sophoriradicis strain L101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sophoriradicis strain L101 Scaffold110_1, whole genome

Gene Summary

Adenine Count

1337900 bp

Thymine Count

1337593 bp

Guanine Count

2101819 bp

Cytosine Count

2106474 bp

Genome Length

6883786 bp

Protein-coding Genes

6296 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCPT34_10740Not AvailablePositive2187913 - 218938550176.3
duf72 domain-containing proteinCPT34_10745Not AvailableNegative2189392 - 219019830270.3
n-acetyltransferaseCPT34_10750Not AvailableNegative2190223 - 219068417340.0
excinuclease abc subunit uvraCPT34_10755Not AvailableNegative2190681 - 2193602107195.0
single-stranded dna-binding proteinCPT34_10760Not AvailablePositive2193886 - 219439818397.1
marc family proteinCPT34_10765Not AvailableNegative2194484 - 219513122566.4
dna gyrase subunit aCPT34_10770Not AvailablePositive2195369 - 2198191104113.0
pantetheine-phosphate adenylyltransferaseCPT34_10780Not AvailablePositive2199180 - 219967417225.0
peptidylprolyl isomeraseCPT34_10785Not AvailablePositive2199731 - 220030320414.5
peptidylprolyl isomeraseCPT34_10790Not AvailablePositive2200332 - 220084118558.1

Displaying genes 2111 – 2120 of 6381 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.