Sphingomonas ginsenosidimutans strain KACC 14949

Rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas ginsenosidimutans strain KACC 14949 is characterized as a microaerophilic, rod-shaped bacterium, which indicates its preference for environments with low oxygen concentrations. This trait is significant for its ecological niche, as it may thrive in specific habitats where oxygen levels are limited. The presence of flagella suggests that this strain is motile, enabling it to navigate its environment effectively, which can be advantageous for accessing nutrients or evading unfavorable conditions. Genetically, S. ginsenosidimutans has a single replicon, which implies a streamlined genomic structure that may relate to its adaptability and efficiency in metabolic processes. The accession number for this strain is NWVD00000000.1, which provides a reference for genetic data and further studies. The microaerophilic nature of S. ginsenosidimutans and its rod-shaped morphology suggest potential roles in biogeochemical cycles, particularly in soil or aquatic environments where oxygen gradients are present. This adaptability to low oxygen conditions may also have implications for its interactions with other microbial communities and its potential applications in bioremediation or biotechnology, especially in contexts where oxygen levels are a limiting factor for microbial activity. The motility conferred by its flagella could facilitate its colonization and survival in such niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas ginsenosidimutans
Strainstrain KACC 14949

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas ginsenosidimutans strain KACC 14949
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas ginsenosidimutans strain KACC 14949 contig57, whole

Gene Summary

Adenine Count

606258 bp

Thymine Count

611915 bp

Guanine Count

1357116 bp

Cytosine Count

1325658 bp

Genome Length

3900947 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorCOA17_06075Not AvailableNegative1294002 - 129435212623.5
esct/ysct/hrct family type iii secretion system export apparatus proteinCOA17_06080Not AvailableNegative1294349 - 129512527014.9
escs/yscs/hrcs family type iii secretion system export apparatus proteinCOA17_06085Not AvailableNegative1295127 - 12953969670.0
escr/yscr/hrcr family type iii secretion system export apparatus proteinCOA17_06090Not AvailableNegative1295410 - 129613825666.3
hypothetical proteinCOA17_06095Not AvailableNegative1296145 - 129715534634.9
flagellar biosynthetic protein flioCOA17_06100Not AvailableNegative1297152 - 129745711062.6
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinCOA17_06105Not AvailableNegative1297501 - 129865241260.3
hypothetical proteinCOA17_06110Not AvailablePositive1299151 - 129992426560.1
type iii secretion proteinCOA17_06115Not AvailablePositive1299921 - 130193671365.1
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinCOA17_06120Not AvailablePositive1301954 - 130392769426.4

Displaying genes 1281 – 1290 of 3677 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.