Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio mediterranei |
| Strain | strain 17LN0615E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sundarbans Forest; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Crassostrea virginica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1639968 bp
Thymine Count
1645173 bp
Guanine Count
1292910 bp
Cytosine Count
1297933 bp
Genome Length
5877037 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp1 family type vi secretion system effector | COR51_24800 | Not Available | Positive | 5317709 - 5318230 | 18068.4 |
| type vi secretion system contractile sheath small subunit | COR51_24805 | Not Available | Positive | 5318250 - 5318756 | 19085.5 |
| type vi secretion system contractile sheath large subunit | COR51_24810 | Not Available | Positive | 5318753 - 5320231 | 54167.3 |
| hypothetical protein | COR51_24815 | Not Available | Positive | 5320288 - 5321685 | 53006.9 |
| type vi secretion system baseplate subunit tsse | COR51_24820 | Not Available | Positive | 5321682 - 5322098 | 15846.5 |
| type vi secretion system baseplate subunit tssf | COR51_24825 | Not Available | Positive | 5322091 - 5323851 | 65295.9 |
| hypothetical protein | COR51_24830 | Not Available | Positive | 5323842 - 5324798 | 36016.9 |
| type vi secretion system atpase tssh | COR51_24835 | Not Available | Positive | 5324843 - 5327449 | 94581.7 |
| mfs transporter | COR51_24840 | Not Available | Positive | 5327466 - 5330057 | 95138.6 |
| abc transporter substrate-binding protein | COR51_24845 | Not Available | Positive | 5330054 - 5331097 | 37732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



