Vibrio mediterranei strain 17LN0615E

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei strain 17LN0615E is a notable microorganism isolated from the Sundarbans Forest, specifically within the unique habitat of the Sundarbans mangrove ecosystem. This strain is characterized by having a single replicon, which indicates a streamlined genetic architecture that may influence its adaptability and functionality in a specialized environment like the mangroves. The genetic sequence of strain 17LN0615E is cataloged under the accession number NWTN00000000.1, providing a reference for further studies and comparisons within the Vibrio genus. This accession can facilitate research into the genomic features of this strain, aiding in understanding its ecological role and potential applications in biotechnology or environmental science. The Sundarbans mangrove ecosystem is known for its rich biodiversity and complex interactions among various microbial species. Vibrio species, including V. mediterranei, often play critical roles in nutrient cycling and decomposition processes in such habitats. The presence of V. mediterranei strain 17LN0615E in this specific environment may indicate its involvement in the ecological dynamics of mangrove ecosystems, such as interactions with other marine organisms or contributions to the health of the mangrove microbiome. In summary, Vibrio mediterranei strain 17LN0615E, with its single replicon and isolation from the Sundarbans mangrove, represents an important microbial entity whose study could enhance our understanding of microbial biodiversity and ecosystem functioning in mangrove habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strainstrain 17LN0615E

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei strain 17LN0615E
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain 17LN0615E Contig_1, whole genome

Gene Summary

Adenine Count

1639968 bp

Thymine Count

1645173 bp

Guanine Count

1292910 bp

Cytosine Count

1297933 bp

Genome Length

5877037 bp

Protein-coding Genes

5335 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is3 family transposaseCOR51_16875Not AvailableNegative3687533 - 368865643329.9
is3 family transposaseCOR51_16885Not AvailableNegative3689203 - 36893304867.62
is66 family insertion sequence hypothetical proteinCOR51_16895Not AvailableNegative3690612 - 369096814146.3
is66 family insertion sequence hypothetical proteinCOR51_16900Not AvailableNegative3690965 - 369131813650.5
duf2986 domain-containing proteinCOR51_16905Not AvailableNegative3691568 - 36917567068.5
nudix domain-containing proteinCOR51_16910Not AvailableNegative3691811 - 369229918466.7
histone deacetylaseCOR51_16915Not AvailableNegative3692296 - 369322534455.4
short-chain dehydrogenaseCOR51_16920Not AvailablePositive3693280 - 369396624799.5
dna topoisomerase iiiCOR51_16925Not AvailableNegative3693985 - 369593772932.6
nad(p)h nitroreductaseCOR51_16930Not AvailableNegative3696038 - 369658619851.9

Displaying genes 3331 – 3340 of 5433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.