Vibrio mediterranei strain 17LN0615E

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei strain 17LN0615E is a notable microorganism isolated from the Sundarbans Forest, specifically within the unique habitat of the Sundarbans mangrove ecosystem. This strain is characterized by having a single replicon, which indicates a streamlined genetic architecture that may influence its adaptability and functionality in a specialized environment like the mangroves. The genetic sequence of strain 17LN0615E is cataloged under the accession number NWTN00000000.1, providing a reference for further studies and comparisons within the Vibrio genus. This accession can facilitate research into the genomic features of this strain, aiding in understanding its ecological role and potential applications in biotechnology or environmental science. The Sundarbans mangrove ecosystem is known for its rich biodiversity and complex interactions among various microbial species. Vibrio species, including V. mediterranei, often play critical roles in nutrient cycling and decomposition processes in such habitats. The presence of V. mediterranei strain 17LN0615E in this specific environment may indicate its involvement in the ecological dynamics of mangrove ecosystems, such as interactions with other marine organisms or contributions to the health of the mangrove microbiome. In summary, Vibrio mediterranei strain 17LN0615E, with its single replicon and isolation from the Sundarbans mangrove, represents an important microbial entity whose study could enhance our understanding of microbial biodiversity and ecosystem functioning in mangrove habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strainstrain 17LN0615E

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei strain 17LN0615E
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain 17LN0615E Contig_1, whole genome

Gene Summary

Adenine Count

1639968 bp

Thymine Count

1645173 bp

Guanine Count

1292910 bp

Cytosine Count

1297933 bp

Genome Length

5877037 bp

Protein-coding Genes

5335 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 1 proteinCOR51_09690Not AvailablePositive2085320 - 208644142355.6
chain-length determining proteinCOR51_09695Not AvailablePositive2086438 - 208786853084.2
glycosyl transferaseCOR51_09700Not AvailablePositive2088001 - 208911641244.8
glycosyl transferaseCOR51_09705Not AvailablePositive2089156 - 209034345071.6
sugar transferaseCOR51_09710Not AvailablePositive2090354 - 209098924275.4
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseCOR51_09715Not AvailableNegative2091016 - 209144115303.4
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseCOR51_09720Not AvailableNegative2091441 - 209178812488.8
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseCOR51_09725Not AvailableNegative2091788 - 209344063031.4
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseCOR51_09730Not AvailableNegative2093530 - 209444434305.4
bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arnaCOR51_09735Not AvailableNegative2094444 - 209642673584.8

Displaying genes 1921 – 1930 of 5433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.