Rhizobium chutanense strain C5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium chutanense strain C5 is characterized as a rod-shaped bacterium, which is a common morphology observed in many members of the Rhizobium genus. The strain possesses flagella, indicating motility, which may facilitate its interaction with plant roots in its ecological niche. Notably, Rhizobium chutanense strain C5 has a single replicon, a feature that can influence its genomic stability and replication efficiency. The strain is cataloged under the accession number NWSV00000000.1, which provides a reference for researchers seeking genomic information or further details about its biological characteristics. The presence of flagella suggests that this strain may be capable of active movement toward root exudates, enhancing its ability to establish symbiotic relationships with host plants. In the context of its ecological role, Rhizobium chutanense strain C5 likely contributes to nitrogen fixation in soil environments where leguminous plants are present. This process is essential for improving soil fertility and supporting plant growth, as nitrogen is a critical nutrient for plant development. The ability of this strain to engage in a symbiotic relationship with legumes underscores its importance in sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium chutanense
Strainstrain C5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium chutanense strain C5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium chutanense strain C5 Scaffold96_1, whole genome shotgun

Gene Summary

Adenine Count

1333813 bp

Thymine Count

1324436 bp

Guanine Count

2095572 bp

Cytosine Count

2129843 bp

Genome Length

6883664 bp

Protein-coding Genes

6377 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
calpastatinCO666_07560Not AvailablePositive1528721 - 152915816102.1
hypothetical proteinCO666_07565Not AvailableNegative1529155 - 15293437324.43
tetr family transcriptional regulatorCO666_07570Not AvailableNegative1529415 - 153003522261.4
hypothetical proteinCO666_07575Not AvailablePositive1530163 - 15303787763.63
type ii toxin-antitoxin system prevent-host-death family antitoxinCO666_07580Not AvailablePositive1530570 - 15308189099.1
vapc toxin family pin domain ribonucleaseCO666_07585Not AvailablePositive1530818 - 153124015150.2
iclr family transcriptional regulatorCO666_07590Not AvailablePositive1531402 - 153224130322.9
amidohydrolase/deacetylase family metallohydrolaseCO666_07595Not AvailableNegative1532264 - 153347243188.9
hypothetical proteinCO666_07600Not AvailableNegative1533601 - 153390610599.6
l-rhamnose catabolism isomeraseCO666_07605Not AvailableNegative1533929 - 153522146900.2

Displaying genes 1501 – 1510 of 6477 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.