Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | COC42_03010 | Not Available | Positive | 624857 - 625777 | 35365.1 |
| conjugal transfer protein trag | COC42_03015 | Not Available | Positive | 625917 - 627935 | 74422.0 |
| copg family transcriptional regulator | COC42_03020 | Not Available | Positive | 627939 - 628343 | 14802.8 |
| p-type conjugative transfer atpase trbb | COC42_03025 | Not Available | Positive | 628340 - 629338 | 35449.9 |
| conjugal transfer protein trbc | COC42_03030 | Not Available | Positive | 629342 - 629674 | 11510.3 |
| conjugal transfer protein | COC42_03035 | Not Available | Positive | 629671 - 629940 | 9193.34 |
| conjugal transfer protein trbe | COC42_03040 | Not Available | Positive | 629934 - 632381 | 89799.4 |
| p-type conjugative transfer protein trbj | COC42_03045 | Not Available | Positive | 632384 - 633136 | 27077.3 |
| p-type conjugative transfer protein trbl | COC42_03050 | Not Available | Positive | 633250 - 634551 | 43992.4 |
| conjugal transfer protein trbf | COC42_03055 | Not Available | Positive | 634555 - 635373 | 30115.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
