Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | COC42_01910 | Not Available | Negative | 397827 - 398477 | 23471.5 |
| hypothetical protein | COC42_01915 | Not Available | Negative | 398482 - 398748 | 8904.62 |
| hypothetical protein | COC42_01920 | Not Available | Negative | 398749 - 399393 | 21882.6 |
| flagellar biosynthetic protein flio | COC42_01925 | Not Available | Negative | 399390 - 399686 | 10615.3 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | COC42_01930 | Not Available | Negative | 399677 - 400816 | 40587.4 |
| lytic transglycosylase | COC42_01935 | Not Available | Positive | 401357 - 402040 | 24752.7 |
| type iii secretion pore protein | COC42_01940 | Not Available | Positive | 402097 - 404001 | 67499.5 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | COC42_01945 | Not Available | Positive | 403998 - 405878 | 66341.4 |
| hypothetical protein | COC42_01950 | Not Available | Positive | 405875 - 407014 | 39269.0 |
| hypothetical protein | COC42_01955 | Not Available | Positive | 407045 - 407356 | 11008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
