Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COC42_01710 | Not Available | Negative | 354245 - 357139 | 101873.0 |
| hypothetical protein | COC42_01715 | Not Available | Positive | 357364 - 357909 | 19278.3 |
| oxidoreductase | COC42_01720 | Not Available | Negative | 357958 - 358899 | 34127.7 |
| protocatechuate 3,4-dioxygenase | COC42_01725 | Not Available | Negative | 358973 - 359869 | 33089.4 |
| protocatechuate 4,5-dioxygenase subunit alpha | COC42_01730 | Not Available | Negative | 359871 - 360281 | 15707.6 |
| 6-phosphogluconate dehydrogenase | COC42_01735 | Not Available | Negative | 360296 - 361171 | 29724.8 |
| phosphoenolpyruvate carboxykinase (atp) | COC42_01740 | Not Available | Negative | 361266 - 362879 | 58235.1 |
| ybjn domain-containing protein | COC42_01745 | Not Available | Negative | 362978 - 363478 | 17846.2 |
| radical sam protein | COC42_01750 | Not Available | Positive | 363565 - 364635 | 39707.8 |
| endonuclease | COC42_01755 | Not Available | Positive | 364662 - 365492 | 30853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
