Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | COC42_15250 | Not Available | Negative | 3208778 - 3209320 | 20407.2 |
| hybrid sensor histidine kinase/response regulator | COC42_15255 | Not Available | Negative | 3209400 - 3211313 | 69245.0 |
| hypothetical protein | COC42_15260 | Not Available | Positive | 3211545 - 3212066 | 19026.3 |
| tryptophan halogenase | COC42_15265 | Not Available | Positive | 3212109 - 3213629 | 55183.5 |
| cation/h(+) antiporter | COC42_15270 | Not Available | Negative | 3213758 - 3215128 | 48012.2 |
| prevent-host-death protein | COC42_15275 | Not Available | Positive | 3215327 - 3215551 | 8519.22 |
| vapc toxin family pin domain ribonuclease | COC42_15280 | Not Available | Positive | 3215554 - 3216057 | 18020.6 |
| crp/fnr family transcriptional regulator | COC42_15285 | Not Available | Positive | 3216227 - 3216958 | 26665.0 |
| hypothetical protein | COC42_15290 | Not Available | Negative | 3216940 - 3217347 | 14203.1 |
| hypothetical protein | COC42_15295 | Not Available | Negative | 3217352 - 3219715 | 88048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
