Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | COC42_01360 | Not Available | Positive | 282209 - 282640 | 14993.2 |
| 50s ribosomal protein l1 | COC42_01365 | Not Available | Positive | 282645 - 283343 | 24009.4 |
| hypothetical protein | COC42_01370 | Not Available | Positive | 283558 - 283761 | 7189.82 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit b | COC42_01375 | Not Available | Negative | 283875 - 285356 | 53731.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | COC42_01380 | Not Available | Negative | 285358 - 286842 | 51841.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | COC42_01385 | Not Available | Negative | 286839 - 287126 | 10162.2 |
| hypothetical protein | COC42_01390 | Not Available | Positive | 287257 - 288357 | 39332.3 |
| holliday junction resolvase ruvx | COC42_01395 | Not Available | Positive | 288354 - 288821 | 16392.8 |
| alpha/beta hydrolase | COC42_01400 | Not Available | Negative | 288910 - 289536 | 22314.2 |
| tigr02117 family protein | COC42_01405 | Not Available | Negative | 289590 - 290204 | 22024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
