Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | COC42_14095 | Not Available | Negative | 2963207 - 2964169 | 33214.2 |
| shikimate 5-dehydrogenase | COC42_14100 | Not Available | Negative | 2964314 - 2965132 | 28680.4 |
| cell division protein zape | COC42_14105 | Not Available | Negative | 2965129 - 2966247 | 41401.2 |
| phenylacetic acid degradation protein | COC42_14110 | Not Available | Negative | 2966244 - 2966684 | 16078.2 |
| succinate dehydrogenase iron-sulfur subunit | COC42_14115 | Not Available | Negative | 2966820 - 2967605 | 29457.6 |
| 2-keto-3-deoxygluconate kinase | COC42_14120 | Not Available | Negative | 2967710 - 2968699 | 33963.2 |
| glucuronate isomerase | COC42_14125 | Not Available | Positive | 2968788 - 2970209 | 52575.0 |
| mannitol dehydrogenase | COC42_14130 | Not Available | Positive | 2970206 - 2971576 | 48170.9 |
| laci family transcriptional regulator | COC42_14135 | Not Available | Negative | 2971662 - 2972672 | 34000.1 |
| sigma-54-dependent fis family transcriptional regulator | COC42_14140 | Not Available | Negative | 2972713 - 2974134 | 50620.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
