Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COC42_13845 | Not Available | Negative | 2902270 - 2904969 | 94821.4 |
| transcriptional regulator | COC42_13850 | Not Available | Negative | 2905052 - 2905615 | 20098.7 |
| hypothetical protein | COC42_13855 | Not Available | Positive | 2905702 - 2906172 | 16739.1 |
| hypothetical protein | COC42_13860 | Not Available | Negative | 2906157 - 2908796 | 90105.9 |
| diaminopimelate epimerase | COC42_13865 | Not Available | Positive | 2908776 - 2909726 | 32729.0 |
| sensor domain-containing diguanylate cyclase | COC42_13870 | Not Available | Positive | 2909764 - 2911557 | 63352.4 |
| hypothetical protein | COC42_13875 | Not Available | Negative | 2911649 - 2911939 | 10023.8 |
| pantoate--beta-alanine ligase | COC42_13880 | Not Available | Negative | 2912017 - 2912865 | 29940.1 |
| atpase | COC42_13885 | Not Available | Positive | 2912948 - 2913745 | 29369.1 |
| molecular chaperone dnaj | COC42_13890 | Not Available | Positive | 2913745 - 2913999 | 9239.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
