Sphingomonas spermidinifaciens strain 9NM-10

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas spermidinifaciens strain 9NM-10 is a Gram-negative, aerobic, rod-shaped bacterium that is motile due to the presence of true flagella. This strain exhibits a mesophilic temperature range, with an optimal growth temperature of 29°C. Sphingomonas species are known for their environmental versatility, and strain 9NM-10 is no exception; it is non-spore-forming and has a single replicon, which is indicative of its cellular structure and genetic organization. The strain's motility may play a significant role in its ecological interactions, allowing it to navigate its environment effectively in search of nutrients or in response to environmental stimuli. The characteristics of Sphingomonas spermidinifaciens strain 9NM-10 suggest its potential in various biological and ecological applications, particularly in bioremediation processes, where motility and the ability to thrive in aerobic conditions can be advantageous for degrading pollutants. Additionally, the strain's mesophilic nature indicates that it could play a role in nutrient cycling in temperate ecosystems where such temperature conditions are prevalent. Overall, the traits of this strain highlight its ecological significance and potential utility in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas spermidinifaciens
Strainstrain 9NM-10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas spermidinifaciens strain 9NM-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas spermidinifaciens strain 9NM-10 contig5, whole genome

Gene Summary

Adenine Count

585013 bp

Thymine Count

579661 bp

Guanine Count

1231811 bp

Cytosine Count

1239206 bp

Genome Length

3635691 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-(carboxyamino)imidazole ribonucleotide synthaseCOC42_12970Not AvailablePositive2720260 - 272133037681.7
sam-dependent methyltransferaseCOC42_12975Not AvailableNegative2721335 - 272206326563.1
polysaccharide synthesis protein gtraCOC42_12980Not AvailableNegative2722067 - 272245014016.5
hypothetical proteinCOC42_12985Not AvailablePositive2722566 - 272434164666.9
aminopeptidase nCOC42_12990Not AvailablePositive2724386 - 272698095632.5
holliday junction branch migration protein ruvaCOC42_12995Not AvailablePositive2726988 - 272757819883.2
glycosyl hydrolaseCOC42_13000Not AvailablePositive2727715 - 272893544306.1
hypothetical proteinCOC42_13005Not AvailableNegative2729032 - 27293049659.79
holliday junction branch migration dna helicase ruvbCOC42_13010Not AvailablePositive2729408 - 273043036983.7
tol-pal system-associated acyl-coa thioesteraseCOC42_13015Not AvailablePositive2730587 - 273103616613.8

Displaying genes 2571 – 2580 of 3425 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.