Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | COC42_01060 | Not Available | Negative | 218389 - 220194 | 66213.0 |
| ribonuclease d | COC42_01065 | Not Available | Positive | 220375 - 221580 | 44358.1 |
| hypothetical protein | COC42_01070 | Not Available | Positive | 221577 - 221867 | 9653.61 |
| d-alanyl-d-alanine carboxypeptidase | COC42_01075 | Not Available | Negative | 222023 - 222643 | 21973.1 |
| rna pseudouridine synthase | COC42_01080 | Not Available | Positive | 222816 - 223481 | 23945.9 |
| lysr family transcriptional regulator | COC42_01085 | Not Available | Positive | 223485 - 224423 | 33223.9 |
| dna-binding response regulator | COC42_01090 | Not Available | Positive | 224535 - 225236 | 26214.9 |
| hypothetical protein | COC42_01095 | Not Available | Positive | 225364 - 226560 | 43137.8 |
| transcriptional regulator | COC42_01100 | Not Available | Positive | 226544 - 227407 | 31776.8 |
| cystathionine beta-lyase | COC42_01105 | Not Available | Negative | 227461 - 228660 | 42707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
