Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COC42_10230 | Not Available | Negative | 2127941 - 2128360 | 15409.2 |
| abc transporter substrate-binding protein | COC42_10235 | Not Available | Negative | 2128366 - 2129811 | 51548.0 |
| hypothetical protein | COC42_10240 | Not Available | Negative | 2129854 - 2130483 | 21686.1 |
| hypothetical protein | COC42_10245 | Not Available | Positive | 2130570 - 2131607 | 34897.1 |
| prepilin-type cleavage/methylation domain-containing protein | COC42_10250 | Not Available | Positive | 2131576 - 2132160 | 20569.9 |
| type ii secretory pathway component pulk-like protein | COC42_10255 | Not Available | Positive | 2132157 - 2133038 | 31805.5 |
| tryptophan 2,3-dioxygenase | COC42_10260 | Not Available | Positive | 2133112 - 2133867 | 28480.1 |
| class v aminotransferase | COC42_10265 | Not Available | Positive | 2133843 - 2135009 | 42195.0 |
| dihydroxy-acid dehydratase | COC42_10270 | Not Available | Positive | 2135077 - 2136927 | 65114.0 |
| acyl-coa synthetase | COC42_10275 | Not Available | Negative | 2137112 - 2138923 | 65235.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
