Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | COC42_10030 | Not Available | Positive | 2091525 - 2092793 | 46569.2 |
| peptide chain release factor 1 | COC42_10035 | Not Available | Positive | 2092790 - 2093863 | 38745.9 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | COC42_10040 | Not Available | Positive | 2093856 - 2094674 | 28488.9 |
| hypothetical protein | COC42_10045 | Not Available | Positive | 2094929 - 2095750 | 31618.7 |
| duf4139 domain-containing protein | COC42_10050 | Not Available | Positive | 2095897 - 2097372 | 52848.2 |
| hypothetical protein | COC42_10055 | Not Available | Positive | 2097306 - 2098892 | 56800.1 |
| hypothetical protein | COC42_10060 | Not Available | Negative | 2098846 - 2099163 | 11387.8 |
| hypothetical protein | COC42_10065 | Not Available | Positive | 2099218 - 2099646 | 14910.4 |
| lipopolysaccharide biosynthesis protein | COC42_10070 | Not Available | Negative | 2099643 - 2101118 | 52124.8 |
| Trna-met | Not Available | Not Available | Positive | 2101711 - 2101787 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
