Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | COC42_08160 | Not Available | Positive | 1719204 - 1719788 | 20909.0 |
| hypothetical protein | COC42_08165 | Not Available | Negative | 1719760 - 1720098 | 12112.5 |
| trna pseudouridine(55) synthase trub | COC42_08170 | Not Available | Positive | 1720196 - 1721086 | 30717.8 |
| 30s ribosomal protein s15 | COC42_08175 | Not Available | Positive | 1721109 - 1721378 | 10144.3 |
| polyribonucleotide nucleotidyltransferase | COC42_08180 | Not Available | Positive | 1721535 - 1723862 | 84164.5 |
| histidine kinase | COC42_08185 | Not Available | Positive | 1723926 - 1725002 | 39096.8 |
| duf4440 domain-containing protein | COC42_08190 | Not Available | Positive | 1725103 - 1725465 | 13548.8 |
| zn-dependent hydrolase | COC42_08195 | Not Available | Negative | 1725590 - 1726768 | 42332.8 |
| glutathione-disulfide reductase | COC42_08200 | Not Available | Positive | 1726892 - 1728241 | 48513.0 |
| gtpase era | COC42_08205 | Not Available | Positive | 1728286 - 1729194 | 33288.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
