Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trae | COC42_05930 | Not Available | Negative | 1244857 - 1245435 | 20888.4 |
| type iv conjugative transfer system protein tral | COC42_05935 | Not Available | Negative | 1245451 - 1245738 | 10566.9 |
| hypothetical protein | COC42_05940 | Not Available | Negative | 1245767 - 1246090 | 10507.1 |
| hypothetical protein | COC42_05945 | Not Available | Positive | 1246493 - 1246981 | 17065.3 |
| hypothetical protein | COC42_05950 | Not Available | Positive | 1247509 - 1248573 | 40607.4 |
| hypothetical protein | COC42_05955 | Not Available | Negative | 1248748 - 1249548 | 28962.4 |
| restriction endonuclease subunit s | COC42_05960 | Not Available | Negative | 1249565 - 1250683 | 40543.5 |
| sam-dependent methyltransferase | COC42_05965 | Not Available | Negative | 1250701 - 1252266 | 57874.2 |
| dead/deah box helicase | COC42_05970 | Not Available | Negative | 1252287 - 1254650 | 88123.5 |
| hypothetical protein | COC42_05975 | Not Available | Negative | 1255062 - 1258751 | 132623.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
