Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | COC42_05880 | Not Available | Negative | 1235441 - 1236520 | 38724.1 |
| type-f conjugative transfer system protein traw | COC42_05885 | Not Available | Negative | 1236526 - 1237146 | 22421.2 |
| type vi secretion protein | COC42_05890 | Not Available | Negative | 1237167 - 1237700 | 19655.5 |
| hypothetical protein | COC42_05895 | Not Available | Negative | 1237687 - 1238085 | 14120.0 |
| hypothetical protein | COC42_05900 | Not Available | Negative | 1238078 - 1238437 | 13056.3 |
| type-iv secretion system protein trac | COC42_05905 | Not Available | Negative | 1238430 - 1241003 | 93892.2 |
| hypothetical protein | COC42_05910 | Not Available | Negative | 1241000 - 1241833 | 27207.2 |
| disulfide bond formation protein dsbc | COC42_05915 | Not Available | Negative | 1241830 - 1242675 | 29321.3 |
| conjugal transfer protein trab | COC42_05920 | Not Available | Negative | 1242714 - 1244051 | 45953.5 |
| conjugal transfer protein trak | COC42_05925 | Not Available | Negative | 1244048 - 1244860 | 28149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
