Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COC42_00410 | Not Available | Negative | 80635 - 82581 | 69540.7 |
| diguanylate cyclase | COC42_00415 | Not Available | Negative | 83071 - 86109 | 109895.0 |
| mfs transporter | COC42_00420 | Not Available | Positive | 86444 - 87694 | 43936.8 |
| xylose isomerase | COC42_00425 | Not Available | Positive | 87691 - 88599 | 32324.7 |
| hypothetical protein | COC42_00430 | Not Available | Positive | 88614 - 89417 | 29053.4 |
| transcriptional initiation protein tat | COC42_00435 | Not Available | Positive | 89417 - 89995 | 20347.3 |
| xylose isomerase | COC42_00440 | Not Available | Positive | 90049 - 90825 | 28807.7 |
| gmc family oxidoreductase | COC42_00445 | Not Available | Positive | 90846 - 92525 | 61974.7 |
| glycosyl transferase family 1 | COC42_00450 | Not Available | Negative | 92553 - 94391 | 66184.2 |
| 5-oxoprolinase | COC42_00455 | Not Available | Positive | 94454 - 98011 | 122663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
