Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas spermidinifaciens |
| Strain | strain 9NM-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
585013 bp
Thymine Count
579661 bp
Guanine Count
1231811 bp
Cytosine Count
1239206 bp
Genome Length
3635691 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chea | COC42_04880 | Not Available | Negative | 1047163 - 1049478 | 81186.4 |
| histidine phosphotransferase | COC42_04885 | Not Available | Negative | 1049646 - 1050290 | 22623.3 |
| hypothetical protein | COC42_04890 | Not Available | Negative | 1050357 - 1050731 | 12439.9 |
| rlua family pseudouridine synthase | COC42_04895 | Not Available | Positive | 1050788 - 1051741 | 33595.6 |
| rna polymerase sigma factor rpoh | COC42_04900 | Not Available | Positive | 1051811 - 1052716 | 34169.1 |
| hypothetical protein | COC42_04905 | Not Available | Negative | 1052836 - 1053621 | 26797.8 |
| type ii secretion system protein gspe | COC42_04910 | Not Available | Negative | 1053608 - 1055065 | 52664.2 |
| general secretion pathway protein gspm | COC42_04915 | Not Available | Negative | 1055062 - 1055559 | 17510.2 |
| general secretion pathway protein gspl | COC42_04920 | Not Available | Negative | 1055556 - 1056632 | 37259.2 |
| type ii secretion system protein gspg | COC42_04925 | Not Available | Positive | 1056642 - 1057112 | 16500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
