Sphingopyxis sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. is characterized by its rod-shaped morphology and possesses a single replicon in its genomic structure. This classification places it within the broader context of the Sphingopyxis genus, which is known for its diverse metabolic capabilities and ecological significance. The genus Sphingopyxis is often associated with the degradation of various organic compounds, which suggests that members of this group may play a role in bioremediation processes. Due to their ability to metabolize complex environmental pollutants, these bacteria could be integral in maintaining ecological balance, particularly in contaminated habitats. The specific strain of Sphingopyxis sp. referenced by the accession NVXM00000000.1 provides a genomic basis for studying its biochemical pathways and potential applications in environmental microbiology. Understanding the genetic makeup and functional attributes of Sphingopyxis sp. could lead to insights into its role in nutrient cycling and organic matter decomposition in various ecosystems. Overall, the examination of such bacterial species enhances our knowledge of microbial diversity and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgroundwater
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingopyxis sp. isolate NORP11 Contig_source1382A_31922,

Gene Summary

Adenine Count

972220 bp

Thymine Count

966223 bp

Guanine Count

1234008 bp

Cytosine Count

1258921 bp

Genome Length

4431811 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylmuramoyl-l-alanine amidaseCOA41_15060Not AvailableNegative3204269 - 320551344625.5
ribonuclease e/gCOA41_15065Not AvailablePositive3206033 - 320872398719.6
peptidase m48COA41_15070Not AvailablePositive3208912 - 321024648550.6
disulfide bond formation protein dsbaCOA41_15075Not AvailablePositive3210364 - 321111626786.8
rrna methyltransferaseCOA41_15080Not AvailableNegative3211113 - 321178724251.4
exopolyphosphataseCOA41_15085Not AvailableNegative3211787 - 321289639810.6
Trna-glnNot AvailableNot AvailablePositive3213118 - 3213191Not Available
iron-sulfur proteinCOA41_15095Not AvailableNegative3213461 - 321479852206.0
hypothetical proteinCOA41_15100Not AvailableNegative3214937 - 321620248509.7
carboxymuconolactone decarboxylaseCOA41_15105Not AvailableNegative3216214 - 321680121774.1

Displaying genes 2991 – 3000 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.