Sphingopyxis sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. is characterized by its rod-shaped morphology and possesses a single replicon in its genomic structure. This classification places it within the broader context of the Sphingopyxis genus, which is known for its diverse metabolic capabilities and ecological significance. The genus Sphingopyxis is often associated with the degradation of various organic compounds, which suggests that members of this group may play a role in bioremediation processes. Due to their ability to metabolize complex environmental pollutants, these bacteria could be integral in maintaining ecological balance, particularly in contaminated habitats. The specific strain of Sphingopyxis sp. referenced by the accession NVXM00000000.1 provides a genomic basis for studying its biochemical pathways and potential applications in environmental microbiology. Understanding the genetic makeup and functional attributes of Sphingopyxis sp. could lead to insights into its role in nutrient cycling and organic matter decomposition in various ecosystems. Overall, the examination of such bacterial species enhances our knowledge of microbial diversity and their contributions to ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgroundwater
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingopyxis sp. isolate NORP11 Contig_source1382A_31922,

Gene Summary

Adenine Count

972220 bp

Thymine Count

966223 bp

Guanine Count

1234008 bp

Cytosine Count

1258921 bp

Genome Length

4431811 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseCOA41_09340Not AvailablePositive2007648 - 200892546143.4
ribulose-phosphate 3-epimeraseCOA41_09345Not AvailablePositive2009046 - 200970823406.1
heparinaseCOA41_09350Not AvailablePositive2009705 - 201149265370.6
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseCOA41_09355Not AvailablePositive2011495 - 201308756261.7
hypothetical proteinCOA41_09360Not AvailablePositive2013229 - 20135199852.21
hypothetical proteinCOA41_09365Not AvailableNegative2013649 - 201405614037.3
signal peptidase iiCOA41_09370Not AvailableNegative2014112 - 201464519994.7
isoleucine--trna ligaseCOA41_09375Not AvailableNegative2014805 - 2017837113551.0
bifunctional riboflavin kinase/fmn adenylyltransferaseCOA41_09380Not AvailableNegative2018162 - 201908533857.2
peptidase m19COA41_09385Not AvailableNegative2019151 - 202031441558.0

Displaying genes 1971 – 1980 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.