Sphingomonadaceae bacterium MED-G03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium MED-G03 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genome of this bacterium is cataloged under the accession number NTKY00000000.1, indicating that it has been sequenced and is available in a public database for further study and analysis. Sphingomonadaceae is known for its diverse metabolic capabilities, often playing a role in bioremediation due to their ability to degrade complex organic compounds. The presence of a single replicon may suggest a streamlined genetic organization, which could contribute to its adaptability in various environments. Understanding the traits of Sphingomonadaceae bacterium MED-G03 can provide insights into its ecological roles, particularly in nutrient cycling and pollution degradation. Its metabolic versatility positions it as a potential candidate for applications in environmental microbiology, particularly in the context of bioremediation strategies aimed at mitigating pollution in contaminated ecosystems. Furthermore, the genomic data available under the specified accession can facilitate comparative studies with other members of the Sphingomonadaceae family, enhancing our understanding of the evolutionary and functional diversity within this group of bacteria.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonadaceae bacterium MED-G03


Gene Summary

Adenine Count

532457 bp

Thymine Count

530619 bp

Guanine Count

1041751 bp

Cytosine Count

1045917 bp

Genome Length

3150744 bp

Protein-coding Genes

2948 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair endonuclease mutlCNE89_00395Not AvailableNegative86117 - 8791964298.2
rod shape-determining proteinCNE89_00400Not AvailablePositive88077 - 8912336729.5
rod shape-determining protein mrecCNE89_00405Not AvailablePositive89140 - 9005131991.5
rod shape-determining protein mredCNE89_00410Not AvailablePositive90048 - 9057519944.3
penicillin-binding protein 2CNE89_00415Not AvailablePositive90572 - 9261473698.5
rod shape-determining protein rodaCNE89_00420Not AvailablePositive92611 - 9372340326.7
Trna-lysNot AvailableNot AvailablePositive93840 - 93915Not Available
tonb-dependent siderophore receptorCNE89_00430Not AvailablePositive94055 - 9613075159.8
nickel uptake transporter family proteinCNE89_00435Not AvailablePositive96152 - 9678422369.7
tonb-dependent receptorCNE89_00440Not AvailablePositive97202 - 9914569486.8

Displaying genes 81 – 90 of 2992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.