Sphingomonadaceae bacterium MED-G03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium MED-G03 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genome of this bacterium is cataloged under the accession number NTKY00000000.1, indicating that it has been sequenced and is available in a public database for further study and analysis. Sphingomonadaceae is known for its diverse metabolic capabilities, often playing a role in bioremediation due to their ability to degrade complex organic compounds. The presence of a single replicon may suggest a streamlined genetic organization, which could contribute to its adaptability in various environments. Understanding the traits of Sphingomonadaceae bacterium MED-G03 can provide insights into its ecological roles, particularly in nutrient cycling and pollution degradation. Its metabolic versatility positions it as a potential candidate for applications in environmental microbiology, particularly in the context of bioremediation strategies aimed at mitigating pollution in contaminated ecosystems. Furthermore, the genomic data available under the specified accession can facilitate comparative studies with other members of the Sphingomonadaceae family, enhancing our understanding of the evolutionary and functional diversity within this group of bacteria.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium MED-G03

Gene Summary

Adenine Count

532457 bp

Thymine Count

530619 bp

Guanine Count

1041751 bp

Cytosine Count

1045917 bp

Genome Length

3150744 bp

Protein-coding Genes

2948 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseCNE89_14115Not AvailablePositive2935652 - 293620020040.4
3-dehydroquinate synthaseCNE89_14120Not AvailablePositive2936191 - 293730338972.7
n-acetyltransferaseCNE89_14125Not AvailableNegative2937314 - 293847142773.1
fatty acid desaturaseCNE89_14130Not AvailablePositive2938628 - 293969838699.8
heme lyase nrfefg subunit nrfeCNE89_14135Not AvailablePositive2939838 - 294041020737.6
dsbe family thiol:disulfide interchange proteinCNE89_14140Not AvailablePositive2940383 - 294093419571.9
cytochrome c biogenesis proteinCNE89_14145Not AvailablePositive2940931 - 294134115096.7
cytochrome c biosynthesis proteinCNE89_14150Not AvailablePositive2941338 - 294198222593.2
potassium transporter kupCNE89_14155Not AvailablePositive2942117 - 294404570009.9
endonucleaseCNE89_14160Not AvailableNegative2944066 - 294521443405.1

Displaying genes 2791 – 2800 of 2992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.