Sphingomonadaceae bacterium MED-G03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium MED-G03 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genome of this bacterium is cataloged under the accession number NTKY00000000.1, indicating that it has been sequenced and is available in a public database for further study and analysis. Sphingomonadaceae is known for its diverse metabolic capabilities, often playing a role in bioremediation due to their ability to degrade complex organic compounds. The presence of a single replicon may suggest a streamlined genetic organization, which could contribute to its adaptability in various environments. Understanding the traits of Sphingomonadaceae bacterium MED-G03 can provide insights into its ecological roles, particularly in nutrient cycling and pollution degradation. Its metabolic versatility positions it as a potential candidate for applications in environmental microbiology, particularly in the context of bioremediation strategies aimed at mitigating pollution in contaminated ecosystems. Furthermore, the genomic data available under the specified accession can facilitate comparative studies with other members of the Sphingomonadaceae family, enhancing our understanding of the evolutionary and functional diversity within this group of bacteria.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonadaceae bacterium MED-G03

Gene Summary

Adenine Count

532457 bp

Thymine Count

530619 bp

Guanine Count

1041751 bp

Cytosine Count

1045917 bp

Genome Length

3150744 bp

Protein-coding Genes

2948 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit bCNE89_11320Not AvailablePositive2394122 - 239630581825.5
hypothetical proteinCNE89_11325Not AvailableNegative2396354 - 239667110602.5
membrane protease subunitCNE89_11330Not AvailableNegative2396757 - 239714313587.3
prolyl aminopeptidaseCNE89_11335Not AvailableNegative2397185 - 239812634822.2
hypothetical proteinCNE89_11340Not AvailableNegative2398209 - 239868517514.5
imidazoleglycerol-phosphate dehydrataseCNE89_11345Not AvailablePositive2398782 - 239936921494.6
gtp cyclohydrolaseCNE89_11350Not AvailablePositive2399393 - 239968310416.6
imidazole glycerol phosphate synthase subunit hishCNE89_11355Not AvailablePositive2399680 - 240029421683.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseCNE89_11360Not AvailablePositive2400326 - 240106325309.2
imidazole glycerol phosphate synthase subunit hisfCNE89_11365Not AvailablePositive2401060 - 240182426337.5

Displaying genes 2241 – 2250 of 2992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.