Sphingomonadaceae bacterium MED-G03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Description

Sphingomonadaceae bacterium MED-G03 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genome of this bacterium is cataloged under the accession number NTKY00000000.1, indicating that it has been sequenced and is available in a public database for further study and analysis. Sphingomonadaceae is known for its diverse metabolic capabilities, often playing a role in bioremediation due to their ability to degrade complex organic compounds. The presence of a single replicon may suggest a streamlined genetic organization, which could contribute to its adaptability in various environments. Understanding the traits of Sphingomonadaceae bacterium MED-G03 can provide insights into its ecological roles, particularly in nutrient cycling and pollution degradation. Its metabolic versatility positions it as a potential candidate for applications in environmental microbiology, particularly in the context of bioremediation strategies aimed at mitigating pollution in contaminated ecosystems. Furthermore, the genomic data available under the specified accession can facilitate comparative studies with other members of the Sphingomonadaceae family, enhancing our understanding of the evolutionary and functional diversity within this group of bacteria.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonadaceae bacterium MED-G03


Gene Summary

Adenine Count

532457 bp

Thymine Count

530619 bp

Guanine Count

1041751 bp

Cytosine Count

1045917 bp

Genome Length

3150744 bp

Protein-coding Genes

2948 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCNE89_00055Not AvailableNegative8191 - 935740920.8
trna dihydrouridine synthase dusbCNE89_00060Not AvailablePositive9476 - 1049836909.8
two-component sensor histidine kinaseCNE89_00065Not AvailablePositive10495 - 1160439397.8
nitrogen regulation protein nr(i)CNE89_00070Not AvailablePositive11604 - 1304952458.6
pas domain-containing sensor histidine kinaseCNE89_00075Not AvailablePositive13160 - 1541581746.7
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive13346 - 13443Not Available
sigma-54-dependent fis family transcriptional regulatorCNE89_00080Not AvailablePositive15405 - 1677550366.4
rna chaperone hfqCNE89_00085Not AvailablePositive16919 - 1740117902.9
gtpase hflxCNE89_00090Not AvailablePositive17518 - 1885248779.0
nucleoside triphosphate pyrophosphohydrolaseCNE89_00095Not AvailableNegative18869 - 1964528828.1

Displaying genes 11 – 20 of 2992 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.