Pseudothioclava arenosa strain CAU 1312

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudothioclava

Description

Pseudothioclava arenosa strain CAU 1312 is characterized by having a single replicon. This trait is significant as it suggests a streamlined genomic organization, which can influence the organism's adaptability and metabolic capacity. The strain is cataloged under the accession number NTJD00000000.1, indicating its sequence data is publicly available for further research and analysis. The presence of a single replicon may imply a simpler regulatory mechanism for gene expression and replication compared to organisms with multiple replicons. This can facilitate rapid responses to environmental changes and enhance survival in fluctuating conditions. The genetic simplicity can also be advantageous in laboratory settings, where ease of manipulation and study is crucial for understanding microbial processes. From an ecological perspective, Pseudothioclava arenosa strain CAU 1312 may play a role in specific niches where adaptability and rapid growth are essential for survival. Its unique genomic features could contribute to its ecological interactions, including nutrient cycling and potential symbiotic relationships within its habitat. Understanding the genomic and biological traits of this strain could provide insights into its ecological role and the broader implications for microbial diversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudothioclava
SpeciesPseudothioclava arenosa
Strainstrain CAU 1312

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudothioclava arenosa strain CAU 1312 contig25, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2655 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna pyrophosphohydrolaseCLN94_08710Not AvailableNegative1764192 - 176468019028.7
peptidase s41CLN94_08715Not AvailableNegative1764691 - 176605548657.5
peptidase m23CLN94_08720Not AvailableNegative1766068 - 176720139427.0
phosphoglycerate mutase (2,3-diphosphoglycerate-independent)CLN94_08725Not AvailableNegative1767198 - 176872154111.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhCLN94_08730Not AvailableNegative1768851 - 176931816909.6
ribosome silencing factorCLN94_08735Not AvailableNegative1769322 - 176967813364.0
3-isopropylmalate dehydratase large subunitCLN94_08740Not AvailablePositive1770119 - 177154651144.1
3-isopropylmalate dehydratase small subunitCLN94_08745Not AvailablePositive1771636 - 177224122418.0
endonucleaseCLN94_08755Not AvailablePositive1773230 - 177438140839.8
epimeraseCLN94_08760Not AvailableNegative1774378 - 177525932543.3

Displaying genes 1771 – 1780 of 2734 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.