Escherichia coli strain KCJK3945

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK3945 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, indicating its ability to grow in both aerobic and anaerobic conditions. This strain typically exists in pairs or singles and demonstrates mobility due to the presence of flagella. It is mesophilic, with an optimal growth temperature of 37°C. KCJK3945 is host-associated and exhibits a diverse range of biotic relationships, being free-living and associated with various hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and several other vertebrates and invertebrates, such as Apis mellifera (honeybees) and Solanum lycopersicum (tomatoes). This broad host range highlights the ecological versatility of the strain. The strain is known for its significant health effects in humans, where it is linked to numerous conditions such as urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe complications like hemolytic uremic syndrome (HUS) and septicemia. Additionally, it can cause foodborne infections and contribute to conditions such as renal failure and colorectal cancer. The pathogenicity of E. coli strain KCJK3945 in humans underscores its potential public health impact, particularly in the context of food safety and infection control. Understanding its diverse host interactions and pathogenic mechanisms is crucial for developing strategies to mitigate the risks associated with its infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK3945

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK3945
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK3945


Gene Summary

Adenine Count

1350016 bp

Thymine Count

1350628 bp

Guanine Count

1359613 bp

Cytosine Count

1366917 bp

Genome Length

5427174 bp

Protein-coding Genes

5060 genes

Non-Coding Genes

372 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive268144 - 268155Not Available
IntegraseA9819_01305Not AvailableNegative270442 - 27138036111.5
ExcisionaseA9819_01310Not AvailableNegative271482 - 27183213000.5
Hypothetical proteinA9819_01315Not AvailableNegative271832 - 27213712147.5
Hypothetical proteinA9819_01320Not AvailableNegative272137 - 27249913672.3
Hypothetical proteinA9819_01325Not AvailableNegative272490 - 27302620258.4
Hypothetical proteinA9819_01330Not AvailableNegative273154 - 27397830402.0
Hypothetical proteinA9819_01335Not AvailableNegative274044 - 27440613088.6
Hypothetical proteinA9819_01340Not AvailablePositive274479 - 2747038022.64
Hypothetical proteinA9819_01345Not AvailablePositive274612 - 2748669767.97

Displaying genes 1 – 10 of 5432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total