Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate (pro-3s)-lyase subunit beta | A9819_03055 | Not Available | Negative | 617965 - 618873 | 33123.7 |
| citrate lyase acp | A9819_03060 | Not Available | Negative | 618870 - 619166 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | A9819_03065 | Not Available | Negative | 619181 - 620239 | 40079.5 |
| histidine kinase | A9819_03070 | Not Available | Positive | 620619 - 622277 | 61659.7 |
| response regulator | A9819_03075 | Not Available | Positive | 622246 - 622926 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | A9819_03080 | Not Available | Negative | 622966 - 624351 | 48415.3 |
| c4-dicarboxylate abc transporter | A9819_03085 | Not Available | Negative | 624335 - 624454 | 4510.52 |
| phospholipid:lipid a palmitoyltransferase | A9819_03090 | Not Available | Positive | 624939 - 625499 | 21770.6 |
| cold-shock protein cspe | A9819_03095 | Not Available | Positive | 625674 - 625883 | 7463.84 |
| fluoride efflux transporter crcb | A9819_03100 | Not Available | Negative | 625937 - 626320 | 13766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





