Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrin d-mannose specific adhesin fimh | A9819_02670 | Not Available | Positive | 548304 - 549311 | 36642.1 |
| fimbriae assembly protein | A9819_02675 | Not Available | Positive | 549322 - 549837 | 18137.6 |
| dna-binding response regulator | A9819_02680 | Not Available | Negative | 549840 - 550472 | 23678.9 |
| Trna-arg | Not Available | Not Available | Positive | 550715 - 550791 | Not Available |
| site-specific integrase | A9819_02690 | Not Available | Negative | 550818 - 551969 | 44547.7 |
| duf4222 domain-containing protein | A9819_02700 | Not Available | Negative | 552168 - 552446 | 10909.2 |
| conjugal transfer protein trar | A9819_02705 | Not Available | Negative | 552494 - 552712 | 8230.79 |
| hypothetical protein | A9819_02710 | Not Available | Negative | 552811 - 553092 | 10459.7 |
| hypothetical protein | A9819_02715 | Not Available | Negative | 553103 - 553294 | 7022.41 |
| duf1317 domain-containing protein | A9819_02720 | Not Available | Negative | 553267 - 553449 | 6754.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





