Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_01825 | Not Available | Positive | 359282 - 359626 | 13047.0 |
| d-alanine--d-alanine ligase a | A9819_01830 | Not Available | Negative | 359650 - 360744 | 39318.0 |
| hypothetical protein | A9819_01835 | Not Available | Positive | 360822 - 360971 | 5803.32 |
| anti-adapter protein irap | A9819_01840 | Not Available | Positive | 361208 - 361468 | 9938.05 |
| alkaline phosphatase | A9819_01845 | Not Available | Positive | 361569 - 362984 | 49436.3 |
| phosphate starvation-inducible protein psif | A9819_01850 | Not Available | Positive | 363103 - 363423 | 11687.2 |
| diguanylate cyclase adra | A9819_01855 | Not Available | Positive | 363525 - 364640 | 41570.0 |
| pyrroline-5-carboxylate reductase | A9819_01860 | Not Available | Negative | 364657 - 365466 | 28146.6 |
| duf188 domain-containing protein | A9819_01865 | Not Available | Positive | 365586 - 366044 | 16970.4 |
| shikimate kinase | A9819_01870 | Not Available | Positive | 366227 - 366751 | 19151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





