Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | A9819_01100 | Not Available | Negative | 231369 - 233219 | 71190.0 |
| type vi secretion system baseplate subunit tsse | A9819_01105 | Not Available | Negative | 233223 - 233636 | 15524.1 |
| hypothetical protein | A9819_01115 | Not Available | Negative | 235170 - 235394 | 8411.01 |
| type vi secretion system contractile sheath small subunit | A9819_01120 | Not Available | Negative | 235429 - 235929 | 18052.4 |
| type vi secretion system tube protein hcp | A9819_01125 | Not Available | Positive | 236583 - 237101 | 19256.8 |
| hypothetical protein | A9819_01130 | Not Available | Positive | 237134 - 237271 | 5028.19 |
| type vi secretion system tip protein vgrg | A9819_01135 | Not Available | Positive | 237311 - 239452 | 79758.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 243755 - 243870 | Not Available |
| sel1 repeat family protein | A9819_01145 | Not Available | Positive | 243764 - 244333 | 21667.7 |
| hypothetical protein | A9819_01150 | Not Available | Positive | 244355 - 244537 | 6608.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





