Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_28660 | Not Available | Positive | 5414607 - 5414816 | 7585.03 |
| lipopolysaccharide 1,2-glucosyltransferase | A9819_28670 | Not Available | Positive | 5415411 - 5416286 | 33961.5 |
| lipopolysaccharide core heptose(ii) kinase rfay | A9819_28675 | Not Available | Positive | 5416296 - 5416988 | 26980.8 |
| udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferase | A9819_28680 | Not Available | Positive | 5417014 - 5418042 | 39394.9 |
| is1 family transposase | A9819_28685 | Not Available | Negative | 5418094 - 5418165 | 2357.77 |
| class c beta-lactamase cmy-2 | A9819_28690 | Not Available | Positive | 5418481 - 5419626 | 42005.6 |
| hypothetical protein | A9819_28705 | Not Available | Positive | 5420936 - 5421433 | 18310.8 |
| cold-shock protein cspi | A9819_28710 | Not Available | Positive | 5421796 - 5422008 | 7684.14 |
| cold-shock protein | A9819_28715 | Not Available | Positive | 5422019 - 5422207 | 7141.65 |
| is66 family transposase | A9819_28725 | Not Available | Negative | 5422775 - 5424367 | 60542.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





